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The source code of Michigan Imputation Server 2 is available on GitHub. Feel free to create issues and pull requests. Before contacting us, please have a look at the FAQ page first.

Michigan Imputation Server 2 Team

Michigan Imputation Server provides a free genotype imputation service using Minimac4. You can upload phased or unphased GWAS genotypes and receive phased and imputed genomes in return. For all uploaded data sets an extensive QC is performed.

Please contact Christian Fuchsberger in case of other problems.

TOPMed Imputation Server Team

Michigan Imputation Server provides a free genotype imputation service using Minimac4. You can upload phased or unphased GWAS genotypes and receive phased and imputed genomes in return. For all uploaded data sets an extensive QC is performed.

Please use this address for all inquiries.

Imputation Server 2 Workflow

The underlying imputation workflow has been developed by Lukas Forer and Sebastian Schönherr from the Institute of Genetic Epidemiology, Medical University of Innsbruck.

Cloud framework: Cloudgene

Imputation engine: Minimac4

Phasing engine: Eagle2